STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04069.1Hypothetical protein; KEGG: tva:TVAG_216960 viral A-type inclusion protein. (440 aa)    
Predicted Functional Partners:
ADQ04070.1
PFAM: histidine kinase HAMP region domain protein; Poly A polymerase regulatory subunit; KEGG: ate:Athe_2744 methyl-accepting chemotaxis sensory transducer.
       0.773
ADQ04068.1
KEGG: cbf:CLI_3470 hypothetical protein.
       0.697
ADQ04067.1
PFAM: glycoside hydrolase starch-binding; S-layer domain-containing protein; KEGG: ate:Athe_0610 glycoside hydrolase starch-binding.
       0.450
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.