Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04168.1PFAM: O-methyltransferase family 3; KEGG: ate:Athe_0734 O-methyltransferase family 3. (212 aa)    
Predicted Functional Partners:
ADQ04169.1
PFAM: peptidase U32; KEGG: ate:Athe_0735 peptidase U32.
 
  
 0.909
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
    0.830
ADQ04170.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.710
ADQ03861.1
PFAM: peptidase U32; KEGG: ate:Athe_0426 peptidase U32.
  
  
 0.685
ADQ04166.1
KEGG: ate:Athe_0732 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein.
  
  
 0.663
ADQ04176.1
PFAM: Methyltransferase type 12; KEGG: ate:Athe_0753 methyltransferase type 11.
 
  
 0.548
ADQ03972.1
SMART: AAA ATPase; KEGG: ate:Athe_0531 AAA ATPase.
  
    0.477
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
    0.444
ADQ04171.1
PFAM: protein of unknown function DUF402; KEGG: ate:Athe_0748 protein of unknown function DUF402.
     
 0.412
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
    0.407
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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