Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04257.1KEGG: ate:Athe_0834 hypothetical protein. (170 aa)    
Predicted Functional Partners:
ADQ04757.1
KEGG: ate:Athe_1421 hypothetical protein.
 
     0.813
ADQ04256.1
PFAM: MCP methyltransferase CheR-type; KEGG: ate:Athe_0833 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type.
       0.781
ADQ04258.1
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: ate:Athe_0835 glycosyl transferase family 4.
       0.781
ADQ03969.1
KEGG: ate:Athe_0528 hypothetical protein.
  
     0.717
ADQ04756.1
KEGG: ate:Athe_1420 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.
 
    0.715
ADQ05269.1
TIGRFAM: primosome, DnaD subunit; KEGG: ate:Athe_2045 primosome, DnaD subunit.
  
     0.640
ADQ05055.1
KEGG: ate:Athe_1766 hypothetical protein.
  
     0.621
ADQ04675.1
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: ate:Athe_1321 transcriptional regulator, RpiR family.
  
     0.563
ADQ04255.1
KEGG: ate:Athe_0832 GCN5-related N-acetyltransferase.
       0.554
ADQ04259.1
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: ate:Athe_0836 hypothetical protein.
       0.531
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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