Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04283.1KEGG: ate:Athe_0860 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (249 aa)    
Predicted Functional Partners:
ADQ04282.1
PFAM: cobalt transport protein; KEGG: ate:Athe_0859 cobalt transport protein.
 
 0.994
ADQ04280.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cac:CAC0771 cobalt transport protein CbiM.
 
 
 0.985
ADQ04281.1
KEGG: tte:TTE0248 hypothetical protein.
 
 
 0.981
ADQ04973.1
PFAM: cobalt transport protein; KEGG: ate:Athe_1686 cobalt transport protein.
 
 0.959
ADQ04249.1
KEGG: ate:Athe_0826 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
     0.737
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
  
 
0.642
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
  
 
0.631
ADQ05650.1
PFAM: BioY protein; KEGG: csc:Csac_0304 BioY protein.
   
 
 0.624
ADQ05725.1
PFAM: BioY protein; KEGG: ate:Athe_2725 BioY protein.
   
 
 0.624
ADQ05056.1
KEGG: ate:Athe_1767 protein of unknown function DUF1393.
   
 
 0.580
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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