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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04300.1KEGG: csc:Csac_1472 hypothetical protein. (119 aa)    
Predicted Functional Partners:
ADQ04709.1
KEGG: csc:Csac_1917 hypothetical protein.
  
     0.703
ADQ05162.1
KEGG: ate:Athe_1900 hypothetical protein.
  
     0.687
ADQ05582.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.653
ADQ04299.1
KEGG: csc:Csac_1471 hypothetical protein.
       0.635
ADQ04291.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: ate:Athe_0879 hypothetical protein.
 
     0.610
ADQ04595.1
KEGG: ate:Athe_1241 hypothetical protein.
  
     0.610
ADQ04008.1
KEGG: ate:Athe_0560 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SH3 type 3 domain protein; SMART: Peptidoglycan-binding LysM.
  
     0.585
ADQ05645.1
KEGG: ate:Athe_2402 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
     0.584
ADQ04368.1
KEGG: ate:Athe_1013 hypothetical protein.
  
     0.575
ADQ04221.1
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: ate:Athe_0799 putative transcriptional regulator.
  
     0.570
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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