STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04311.1PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: ate:Athe_0933 glycerol-3-phosphate responsive antiterminator, GlpP. (188 aa)    
Predicted Functional Partners:
ADQ04310.1
PFAM: protein of unknown function DUF1667; KEGG: ate:Athe_0932 protein of unknown function DUF1667.
 
    0.736
ADQ04308.1
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ate:Athe_0930 FAD dependent oxidoreductase.
 
     0.735
ADQ04309.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ate:Athe_0931 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.647
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.626
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
    0.572
ADQ03919.1
Carbohydrate kinase, FGGY-like protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.544
ADQ04314.1
PFAM: protein of unknown function DUF523; KEGG: ate:Athe_0936 protein of unknown function DUF523.
       0.531
ADQ04315.1
KEGG: ate:Athe_0937 transcriptional regulator, AraC family; PFAM: Transcription regulator,histidine kinase sensor-like; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
       0.470
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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