STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (389 aa)    
Predicted Functional Partners:
ADQ04316.1
TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: ate:Athe_0938 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
 0.999
ADQ04318.1
KEGG: ate:Athe_0940 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.971
ADQ04527.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: ate:Athe_1148 NAD-dependent epimerase/dehydratase.
 
 
 0.900
ADQ04934.1
PFAM: Aldose 1-epimerase; KEGG: ate:Athe_1638 aldose 1-epimerase.
  
 0.863
ADQ03926.1
Alpha-galactosidase; KEGG: ate:Athe_0468 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D.
 
  
 0.740
ADQ03828.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: csc:Csac_1172 oxidoreductase domain-containing protein.
  
 
 0.647
ADQ05574.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ate:Athe_2334 oxidoreductase domain protein.
  
 
 0.647
ADQ05669.1
PFAM: oxidoreductase domain protein; KEGG: ate:Athe_2585 oxidoreductase domain protein.
  
 
 0.647
ADQ04593.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ate:Athe_1239 oxidoreductase domain protein.
  
 
 0.621
ADQ05608.1
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: csc:Csac_0362 glycoside hydrolase family protein.
 
  
 0.621
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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