Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ADQ04359.1PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_1005 major facilitator superfamily MFS_1. (446 aa)    
Predicted Functional Partners:
ADQ05466.1
KEGG: ate:Athe_2260 hypothetical protein.
  
     0.637
ADQ05652.1
KEGG: csc:Csac_0293 hypothetical protein.
  
     0.636
ADQ04571.1
PFAM: NUDIX hydrolase; KEGG: ate:Athe_1217 NUDIX hydrolase.
  
     0.549
ADQ04901.1
KEGG: csc:Csac_0666 hypothetical protein.
  
     0.532
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.517
ADQ03724.1
KEGG: csc:Csac_2415 hypothetical protein.
  
     0.502
ADQ05190.1
PFAM: protein of unknown function DUF1362; KEGG: csc:Csac_1017 hypothetical protein.
  
     0.489
ADQ05665.1
KEGG: csc:Csac_0424 hypothetical protein.
  
     0.487
ADQ03727.1
PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein.
  
     0.483
ADQ04360.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
       0.480
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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