Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
ADQ04366.1KEGG: ate:Athe_1011 hypothetical protein. (325 aa)    
Predicted Functional Partners:
ADQ04365.1
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
       0.781
ADQ04363.1
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
       0.616
ADQ04364.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: ate:Athe_1009 pyruvate ferredoxin/flavodoxin oxidoreductase.
       0.616
ADQ04367.1
PFAM: protein of unknown function DUF421; KEGG: ate:Athe_1012 protein of unknown function DUF421.
       0.587
ADQ04368.1
KEGG: ate:Athe_1013 hypothetical protein.
       0.587
ADQ04369.1
KEGG: ate:Athe_1014 hypothetical protein.
       0.434
ADQ04370.1
KEGG: ate:Athe_1015 CoA-binding domain protein; manually curated; PFAM: CoA-binding domain protein.
       0.424
ADQ04362.1
KEGG: ate:Athe_1007 hypothetical protein.
       0.417
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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