STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04381.1KEGG: tva:TVAG_308080 hypothetical protein. (92 aa)    
Predicted Functional Partners:
ADQ04378.1
Helix-turn-helix domain protein; KEGG: chy:CHY_1694 putative prophage LambdaCh01, transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.610
ADQ04379.1
Prophage antirepressor; PFAM: BRO domain protein; phage antirepressor protein; KEGG: gka:GK0519 phage associated-antirepressor.
       0.610
ADQ04380.1
KEGG: dae:Dtox_3699 hypothetical protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Peptidoglycan-binding lysin domain.
       0.610
ADQ04382.1
KEGG: pgu:PGUG_04397 hypothetical protein.
       0.520
ADQ04383.1
Hypothetical protein; KEGG: gtn:GTNG_1712 respiratory nitrate reductase alpha subunit.
       0.520
ADQ04384.1
KEGG: cth:Cthe_2464 hypothetical protein.
       0.520
ADQ04377.1
Helix-turn-helix domain protein; KEGG: chy:CHY_1696 prophage LambdaCh01, PBSX family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.517
ADQ04385.1
KEGG: aoe:Clos_1293 hypothetical protein.
       0.498
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.