Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04395.1TIGRFAM: phage terminase, large subunit, PBSX family; KEGG: ctc:CTC01086 phage terminase large subunit. (404 aa)    
Predicted Functional Partners:
ADQ04397.1
PFAM: minor capsid 2 protein; KEGG: minor capsid 2 protein.
 
   
 0.838
ADQ04396.1
KEGG: prophage LambdaCh01, portal protein.
 
     0.834
ADQ04394.1
KEGG: csc:Csac_0574 hypothetical protein.
       0.780
ADQ04398.1
KEGG: hypothetical protein.
       0.712
ADQ04391.1
PFAM: endodeoxyribonuclease RusA; KEGG: ate:Athe_2445 endodeoxyribonuclease RusA.
 
     0.611
ADQ04399.1
KEGG: hypothetical protein.
       0.541
ADQ04387.1
AAA ATPase; KEGG: tit:Thit_1404 AAA ATPase; manually curated; SMART: AAA ATPase.
 
    0.521
ADQ04393.1
TIGRFAM: phage transcriptional regulator, RinA family; KEGG: chy:CHY_1683 prophage LambdaCh01, RinA family protein protein phage transcriptional regulator.
  
    0.484
ADQ04386.1
Hypothetical protein; KEGG: lsp:Bsph_1775 phage replication protein.
  
  
 0.449
ADQ04392.1
Hypothetical protein; Manually curated; KEGG: cbi:CLJ_B0158 cyanophycin synthetase.
       0.438
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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