Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADQ04397.1PFAM: minor capsid 2 protein; KEGG: minor capsid 2 protein. (476 aa)    
Predicted Functional Partners:
ADQ04396.1
KEGG: prophage LambdaCh01, portal protein.
 
     0.943
ADQ04400.1
KEGG: chy:CHY_1672 putative prophage LambdaCh01, scaffold protein.
 
     0.852
ADQ04395.1
TIGRFAM: phage terminase, large subunit, PBSX family; KEGG: ctc:CTC01086 phage terminase large subunit.
 
   
 0.838
ADQ04398.1
KEGG: hypothetical protein.
       0.762
ADQ04394.1
KEGG: csc:Csac_0574 hypothetical protein.
       0.730
ADQ04391.1
PFAM: endodeoxyribonuclease RusA; KEGG: ate:Athe_2445 endodeoxyribonuclease RusA.
 
     0.578
ADQ04399.1
KEGG: hypothetical protein.
       0.576
ADQ04408.1
TIGRFAM: phage tape measure protein; KEGG: pth:PTH_2178 endoglucanase Y.
 
    0.554
ADQ05465.1
PFAM: sodium/hydrogen exchanger; KEGG: tte:TTE1901 Kef-type K+ transport systems, membrane components.
  
     0.523
ADQ04387.1
AAA ATPase; KEGG: tit:Thit_1404 AAA ATPase; manually curated; SMART: AAA ATPase.
 
   
 0.471
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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