STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04403.1KEGG: chy:CHY_1668 hypothetical protein. (97 aa)    
Predicted Functional Partners:
ADQ04404.1
KEGG: chy:CHY_1667 hypothetical protein.
       0.787
ADQ04405.1
Hypothetical protein.
       0.773
ADQ04402.1
KEGG: chy:CHY_1669 hypothetical protein.
       0.764
ADQ04401.1
KEGG: hau:Haur_0657 hypothetical protein.
       0.511
ADQ04400.1
KEGG: chy:CHY_1672 putative prophage LambdaCh01, scaffold protein.
       0.461
ADQ04406.1
KEGG: mar:MAE_02000 hypothetical protein.
       0.431
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.