STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04407.1KEGG: dvm:DvMF_1648 hypothetical protein. (118 aa)    
Predicted Functional Partners:
ADQ04406.1
KEGG: mar:MAE_02000 hypothetical protein.
       0.608
ADQ04408.1
TIGRFAM: phage tape measure protein; KEGG: pth:PTH_2178 endoglucanase Y.
       0.436
ADQ04409.1
KEGG: gka:GK0545 hypothetical protein.
       0.421
ADQ04410.1
PFAM: Kelch repeat type 1-containing protein; KEGG: cin:100179922 similar to Kelch-like protein 12 (CUL3-interacting protein 1).
       0.421
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.