Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04454.1PFAM: protein of unknown function DUF1385; KEGG: ate:Athe_1069 protein of unknown function DUF1385. (313 aa)    
Predicted Functional Partners:
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
      0.972
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
    0.811
ADQ04669.1
Agmatinase; KEGG: ate:Athe_1315 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
   
    0.745
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
       0.682
ADQ04054.1
KEGG: ate:Athe_0604 hypothetical protein.
   
    0.545
ADQ04458.1
PFAM: OmpA/MotB domain protein; KEGG: ate:Athe_1073 OmpA/MotB domain protein.
       0.533
ADQ04457.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: ate:Athe_1072 MotA/TolQ/ExbB proton channel.
       0.532
ADQ04459.1
PFAM: zinc/iron permease; KEGG: ate:Athe_1074 zinc/iron permease.
       0.496
ADQ04460.1
Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.496
ADQ04461.1
KEGG: ate:Athe_1076 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
       0.496
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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