STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04465.1KEGG: ate:Athe_1080 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; SMART: cell wall hydrolase/autolysin. (703 aa)    
Predicted Functional Partners:
ADQ03865.1
KEGG: ate:Athe_0430 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
  
  
 
0.927
ADQ04449.1
N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; manually curated; KEGG: ate:Athe_1064 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin.
  
  
 
0.918
ADQ05724.1
PFAM: Rhomboid family protein; KEGG: ate:Athe_2713 rhomboid family protein.
  
   0.760
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
       0.529
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.479
cinA
KEGG: ate:Athe_0985 competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; Belongs to the CinA family.
 
     0.433
ADQ03873.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein.
  
    0.414
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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