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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04487.1KEGG: ate:Athe_1102 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR. (304 aa)    
Predicted Functional Partners:
ADQ05452.1
PFAM: protein of unknown function DUF1680; KEGG: ate:Athe_2242 protein of unknown function DUF1680.
 
     0.581
ADQ05468.1
PFAM: protein of unknown function DUF1680; KEGG: csc:Csac_0717 hypothetical protein.
 
     0.579
ADQ04492.1
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: ate:Athe_1103 alpha-N-arabinofuranosidase; SMART: alpha-L-arabinofuranosidase domain protein.
 
     0.476
ADQ05300.1
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: ate:Athe_1103 alpha-N-arabinofuranosidase; SMART: alpha-L-arabinofuranosidase domain protein.
 
     0.476
ADQ05276.1
KEGG: ate:Athe_2056 putative sensor with HAMP domain.
  
     0.447
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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