Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04492.1Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: ate:Athe_1103 alpha-N-arabinofuranosidase; SMART: alpha-L-arabinofuranosidase domain protein. (505 aa)    
Predicted Functional Partners:
uxaC
KEGG: csc:Csac_1949 glucuronate isomerase; PFAM: Glucuronate isomerase.
   
 
 0.818
xylA
TIGRFAM: xylose isomerase; KEGG: ate:Athe_0603 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family.
    
 0.810
ADQ05245.1
PFAM: glycoside hydrolase family 4; KEGG: ate:Athe_2028 glycoside hydrolase family 4.
     
  0.800
ADQ04488.1
PFAM: extracellular solute-binding protein family 1; KEGG: bld:BLi03024 AraN.
 
  
 0.743
ADQ04491.1
PFAM: glycoside hydrolase family 43; KEGG: csc:Csac_1560 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.724
ADQ05468.1
PFAM: protein of unknown function DUF1680; KEGG: csc:Csac_0717 hypothetical protein.
 
   
 0.585
ADQ05452.1
PFAM: protein of unknown function DUF1680; KEGG: ate:Athe_2242 protein of unknown function DUF1680.
 
   
 0.582
ADQ04489.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
 
    0.542
ADQ04012.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.537
ADQ04493.1
PFAM: glycoside hydrolase family 4; KEGG: ate:Athe_1104 glycoside hydrolase family 4.
 
     0.530
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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