STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04595.1KEGG: ate:Athe_1241 hypothetical protein. (396 aa)    
Predicted Functional Partners:
ADQ04596.1
KEGG: ate:Athe_1242 hypothetical protein.
 
    
0.839
ADQ04597.1
PFAM: glycosyl transferase group 1; KEGG: ate:Athe_1243 glycosyl transferase group 1.
 
  
 0.824
ADQ04594.1
KEGG: ate:Athe_1240 hexapaptide repeat-containing transferase.
  
  
 0.791
ADQ04593.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ate:Athe_1239 oxidoreductase domain protein.
       0.778
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.773
ADQ05582.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.773
ADQ03645.1
KEGG: csc:Csac_2571 hypothetical protein.
  
     0.772
ADQ03873.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein.
  
     0.772
ADQ05674.1
KEGG: ate:Athe_2600 hypothetical protein.
 
     0.769
ADQ03649.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: csc:Csac_2566 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
  
  
 0.764
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.