Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04644.1KEGG: ate:Athe_1290 hypothetical protein. (117 aa)    
Predicted Functional Partners:
ADQ04645.1
PFAM: ATP-binding region ATPase domain protein; KEGG: ate:Athe_1291 putative anti-sigma regulatory factor, serine/threonine protein kinase.
   
 0.985
ADQ04646.1
PFAM: Fe-S cluster domain protein; KEGG: ate:Athe_1292 Fe-S cluster domain protein.
 
   
 0.946
ADQ04647.1
KEGG: ate:Athe_1293 hypothetical protein.
 
  
 0.943
ADQ04648.1
KEGG: ate:Athe_1294 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein.
 
   
 0.937
ADQ04650.1
KEGG: ate:Athe_1296 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
   
 0.887
ADQ04651.1
KEGG: ate:Athe_1297 hypothetical protein.
 
   
 0.886
dxs
Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.717
ADQ04643.1
TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ate:Athe_1289 hemolysin A; SMART: RNA-binding S4 domain protein.
       0.717
ADQ04641.1
KEGG: ate:Athe_1287 hypothetical protein.
       0.673
ADQ04652.1
KEGG: ate:Athe_1298 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
 
   
 0.644
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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