ADQ04701.1 protein (Caldicellulosiruptor owensensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Caldicellulosiruptor owensensis

NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADQ04700.1	ADQ04701.1	Calow_1138	Calow_1139	PFAM: protein of unknown function YGGT; KEGG: ate:Athe_1346 protein of unknown function YGGT.	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	0.926
ADQ04700.1	sepF	Calow_1138	Calow_1137	PFAM: protein of unknown function YGGT; KEGG: ate:Athe_1346 protein of unknown function YGGT.	Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.	0.975
ADQ04701.1	ADQ04700.1	Calow_1139	Calow_1138	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	PFAM: protein of unknown function YGGT; KEGG: ate:Athe_1346 protein of unknown function YGGT.	0.926
ADQ04701.1	ADQ05113.1	Calow_1139	Calow_1567	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	0.855
ADQ04701.1	rplQ	Calow_1139	Calow_1458	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	KEGG: ate:Athe_1716 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17.	0.789
ADQ04701.1	rplS	Calow_1139	Calow_0756	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.789
ADQ04701.1	rplT	Calow_1139	Calow_0997	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.789
ADQ04701.1	rplU	Calow_1139	Calow_0933	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.789
ADQ04701.1	rpmA	Calow_1139	Calow_0935	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	KEGG: ate:Athe_1120 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.789
ADQ04701.1	rpmF	Calow_1139	Calow_1050	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	KEGG: ate:Athe_1259 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family.	0.789
ADQ04701.1	rpmG	Calow_1139	Calow_1309	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	KEGG: ate:Athe_1534 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.789
ADQ04701.1	sepF	Calow_1139	Calow_1137	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.	0.915
ADQ05113.1	ADQ04701.1	Calow_1567	Calow_1139	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	0.855
ADQ05113.1	rplQ	Calow_1567	Calow_1458	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	KEGG: ate:Athe_1716 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17.	0.623
ADQ05113.1	rplS	Calow_1567	Calow_0756	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.732
ADQ05113.1	rplT	Calow_1567	Calow_0997	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.623
ADQ05113.1	rplU	Calow_1567	Calow_0933	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.623
ADQ05113.1	rpmA	Calow_1567	Calow_0935	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	KEGG: ate:Athe_1120 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.623
ADQ05113.1	rpmF	Calow_1567	Calow_1050	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	KEGG: ate:Athe_1259 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family.	0.623
ADQ05113.1	rpmG	Calow_1567	Calow_1309	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: ate:Athe_1823 fibronectin-binding A domain protein.	KEGG: ate:Athe_1534 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.623

page 1 of 4

Server load: low (14%) [HD]

Share

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About