Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ04708.1PFAM: peptidase M56 BlaR1; KEGG: ate:Athe_1355 peptidase M56 BlaR1. (519 aa)    
Predicted Functional Partners:
ADQ04707.1
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: ate:Athe_1354 transcriptional repressor, CopY family.
 
 
 0.997
ADQ04709.1
KEGG: csc:Csac_1917 hypothetical protein.
     0.722
ADQ05582.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.670
ADQ03873.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein.
  
     0.667
ADQ03645.1
KEGG: csc:Csac_2571 hypothetical protein.
  
     0.627
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.625
ADQ04595.1
KEGG: ate:Athe_1241 hypothetical protein.
  
     0.602
ADQ05674.1
KEGG: ate:Athe_2600 hypothetical protein.
  
     0.583
ADQ04563.1
KEGG: ate:Athe_1209 hypothetical protein.
  
     0.572
ADQ04160.1
KEGG: ate:Athe_0715 hypothetical protein.
  
     0.571
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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