Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADQ04733.1PFAM: Extracellular ligand-binding receptor; KEGG: ate:Athe_1388 extracellular ligand-binding receptor. (390 aa)    
Predicted Functional Partners:
ADQ04731.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_1386 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
ADQ04730.1
KEGG: ate:Athe_1385 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.996
ADQ04732.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_1387 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
ADQ04729.1
KEGG: ate:Athe_1384 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.994
ADQ03964.1
PFAM: Extracellular ligand-binding receptor; KEGG: ate:Athe_0523 extracellular ligand-binding receptor.
  
  
 
0.901
ADQ04017.1
PFAM: ANTAR domain protein; KEGG: ate:Athe_0569 response regulator receiver and ANTAR domain protein.
  
 
 0.678
ADQ04734.1
KEGG: ate:Athe_1389 protein of unknown function DUF1867.
       0.510
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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