Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADQ04776.1 | ADQ04779.1 | Calow_1218 | Calow_1221 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | KEGG: ate:Athe_1442 hypothetical protein. | 0.782 |
| ADQ04776.1 | ADQ04949.1 | Calow_1218 | Calow_1398 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.541 |
| ADQ04776.1 | ADQ04962.1 | Calow_1218 | Calow_1415 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | KEGG: csc:Csac_1665 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein. | 0.630 |
| ADQ04776.1 | ADQ05379.1 | Calow_1218 | Calow_1850 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | KEGG: ate:Athe_2160 CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein. | 0.613 |
| ADQ04776.1 | ADQ05389.1 | Calow_1218 | Calow_1860 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: ate:Athe_2170 ATPase, FliI/YscN family; SMART: AAA ATPase. | 0.532 |
| ADQ04776.1 | coaE | Calow_1218 | Calow_1219 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.873 |
| ADQ04776.1 | fliE | Calow_1218 | Calow_1864 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | KEGG: ate:Athe_2174 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE. | 0.522 |
| ADQ04776.1 | polA | Calow_1218 | Calow_1220 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.859 |
| ADQ04776.1 | uvrA | Calow_1218 | Calow_1216 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.577 |
| ADQ04776.1 | uvrB | Calow_1218 | Calow_1217 | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.577 |
| ADQ04779.1 | ADQ04776.1 | Calow_1221 | Calow_1218 | KEGG: ate:Athe_1442 hypothetical protein. | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | 0.782 |
| ADQ04779.1 | coaE | Calow_1221 | Calow_1219 | KEGG: ate:Athe_1442 hypothetical protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.782 |
| ADQ04779.1 | polA | Calow_1221 | Calow_1220 | KEGG: ate:Athe_1442 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.802 |
| ADQ04779.1 | uvrA | Calow_1221 | Calow_1216 | KEGG: ate:Athe_1442 hypothetical protein. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.558 |
| ADQ04779.1 | uvrB | Calow_1221 | Calow_1217 | KEGG: ate:Athe_1442 hypothetical protein. | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.559 |
| ADQ04949.1 | ADQ04776.1 | Calow_1398 | Calow_1218 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1439 lytic transglycosylase catalytic. | 0.541 |
| ADQ04949.1 | ADQ04962.1 | Calow_1398 | Calow_1415 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | KEGG: csc:Csac_1665 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein. | 0.961 |
| ADQ04949.1 | ADQ05379.1 | Calow_1398 | Calow_1850 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | KEGG: ate:Athe_2160 CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein. | 0.995 |
| ADQ04949.1 | ADQ05389.1 | Calow_1398 | Calow_1860 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: ate:Athe_2170 ATPase, FliI/YscN family; SMART: AAA ATPase. | 0.986 |
| ADQ04949.1 | fliE | Calow_1398 | Calow_1864 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | KEGG: ate:Athe_2174 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE. | 0.926 |
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