STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04795.1KEGG: ate:Athe_1458 hypothetical protein. (119 aa)    
Predicted Functional Partners:
ADQ04714.1
KEGG: ate:Athe_1362 hypothetical protein.
  
     0.766
ADQ04353.1
KEGG: ate:Athe_0999 hypothetical protein.
  
     0.735
ADQ04794.1
PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: ate:Athe_1457 AIR synthase related protein domain protein.
       0.699
ADQ05054.1
PFAM: Sporulation protein YtxC; KEGG: ate:Athe_1765 sporulation protein YtxC.
  
    0.692
ADQ05088.1
SMART: PDZ/DHR/GLGF domain protein; KEGG: ate:Athe_1797 PDZ/DHR/GLGF domain protein.
 
    0.675
ADQ04793.1
KEGG: ate:Athe_1456 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
       0.659
ADQ04796.1
KEGG: ate:Athe_1459 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.639
ADQ05125.1
KEGG: ate:Athe_1835 uncharacterized membrane protein.
  
     0.618
ADQ04035.1
PFAM: helix-turn-helix domain protein; KEGG: ate:Athe_0586 hypothetical protein.
  
     0.611
ADQ04792.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ate:Athe_1455 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
       0.602
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.