STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04799.1PFAM: polysaccharide deacetylase; KEGG: ate:Athe_1462 polysaccharide deacetylase. (257 aa)    
Predicted Functional Partners:
ADQ03888.1
PFAM: glycosyl transferase family 2; KEGG: ate:Athe_0452 glycosyl transferase family 2.
 
  
 0.907
ADQ04797.1
PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ate:Athe_1460 single-strand binding protein/primosomal replication protein N.
 
    0.601
ADQ04798.1
Hypothetical protein; Manually curated; KEGG: ate:Athe_1461 hypothetical protein.
       0.587
ADQ04800.1
KEGG: ate:Athe_1463 hypothetical protein.
       0.568
ADQ03663.1
KEGG: ate:Athe_0089 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
      0.518
ADQ03686.1
KEGG: swo:Swol_1120 hypothetical protein.
  
  
 0.487
ADQ03711.1
PFAM: glycosyl transferase family 2; KEGG: ate:Athe_0167 glycosyl transferase family 2.
  
  
 0.487
ADQ04801.1
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ate:Athe_1464 UBA/ThiF-type NAD/FAD binding protein.
       0.438
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.