node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ03842.1 | ADQ03844.1 | Calow_0239 | Calow_0241 | Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | KEGG: ate:Athe_0371 thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein. | 0.979 |
ADQ03842.1 | thiI | Calow_0239 | Calow_1324 | Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.935 |
ADQ03844.1 | ADQ03842.1 | Calow_0241 | Calow_0239 | KEGG: ate:Athe_0371 thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein. | Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.979 |
ADQ03844.1 | thiI | Calow_0241 | Calow_1324 | KEGG: ate:Athe_0371 thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.900 |
ADQ04426.1 | ADQ04883.1 | Calow_0858 | Calow_1326 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.460 |
ADQ04426.1 | prmA | Calow_0858 | Calow_1327 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.608 |
ADQ04426.1 | thiI | Calow_0858 | Calow_1324 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.969 |
ADQ04879.1 | ADQ04880.1 | Calow_1322 | Calow_1323 | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | Manually curated; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ate:Athe_1545 pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. | 0.782 |
ADQ04879.1 | ADQ04882.1 | Calow_1322 | Calow_1325 | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | PFAM: aminotransferase class V; KEGG: ate:Athe_1547 aminotransferase class V. | 0.748 |
ADQ04879.1 | ADQ04883.1 | Calow_1322 | Calow_1326 | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.713 |
ADQ04879.1 | dnaJ | Calow_1322 | Calow_1328 | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.607 |
ADQ04879.1 | prmA | Calow_1322 | Calow_1327 | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.719 |
ADQ04879.1 | thiI | Calow_1322 | Calow_1324 | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.780 |
ADQ04880.1 | ADQ04879.1 | Calow_1323 | Calow_1322 | Manually curated; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ate:Athe_1545 pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | 0.782 |
ADQ04880.1 | ADQ04882.1 | Calow_1323 | Calow_1325 | Manually curated; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ate:Athe_1545 pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. | PFAM: aminotransferase class V; KEGG: ate:Athe_1547 aminotransferase class V. | 0.758 |
ADQ04880.1 | ADQ04883.1 | Calow_1323 | Calow_1326 | Manually curated; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ate:Athe_1545 pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.762 |
ADQ04880.1 | dnaJ | Calow_1323 | Calow_1328 | Manually curated; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ate:Athe_1545 pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.635 |
ADQ04880.1 | prmA | Calow_1323 | Calow_1327 | Manually curated; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ate:Athe_1545 pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.717 |
ADQ04880.1 | thiI | Calow_1323 | Calow_1324 | Manually curated; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ate:Athe_1545 pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.804 |
ADQ04882.1 | ADQ04879.1 | Calow_1325 | Calow_1322 | PFAM: aminotransferase class V; KEGG: ate:Athe_1547 aminotransferase class V. | PFAM: peptidase M29 aminopeptidase II; KEGG: ate:Athe_1544 peptidase M29 aminopeptidase II. | 0.748 |