Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04901.1KEGG: csc:Csac_0666 hypothetical protein. (571 aa)    
Predicted Functional Partners:
ADQ05652.1
KEGG: csc:Csac_0293 hypothetical protein.
  
     0.753
ADQ05665.1
KEGG: csc:Csac_0424 hypothetical protein.
  
     0.721
ADQ03826.1
PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_0342 major facilitator superfamily MFS_1.
  
     0.708
ADQ04270.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0849 extracellular solute-binding protein family 1.
  
     0.698
ADQ05607.1
KEGG: ate:Athe_2369 hypothetical protein.
  
     0.668
ADQ05153.1
KEGG: ate:Athe_1891 hypothetical protein.
  
     0.649
ADQ03723.1
PFAM: NHL repeat containing protein; KEGG: csc:Csac_2416 hypothetical protein.
  
     0.612
ADQ03724.1
KEGG: csc:Csac_2415 hypothetical protein.
  
     0.609
ADQ04600.1
KEGG: ate:Athe_1246 hypothetical protein.
  
     0.602
ADQ05304.1
KEGG: ate:Athe_2076 glycoside hydrolase family 2 sugar binding.
  
     0.602
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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