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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04927.1KEGG: ate:Athe_1631 hypothetical protein. (84 aa)    
Predicted Functional Partners:
ADQ05163.1
PFAM: PemK family protein; KEGG: ate:Athe_1901 transcriptional modulator of MazE/toxin, MazF.
  
 
 0.891
ADQ04925.1
KEGG: ate:Athe_1629 hypothetical protein.
 
     0.738
ADQ04926.1
KEGG: ate:Athe_1630 methyl-accepting chemotaxis sensory transducer; PFAM: Heme NO binding domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.
       0.707
ADQ04928.1
PFAM: Lytic transglycosylase catalytic; KEGG: ate:Athe_1632 lytic transglycosylase catalytic.
       0.655
ADQ04929.1
KEGG: ate:Athe_1633 hypothetical protein.
       0.521
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.512
ADQ04924.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: ate:Athe_1628 protein of unknown function DUF6 transmembrane.
       0.493
ADQ05162.1
KEGG: ate:Athe_1900 hypothetical protein.
 
     0.432
ADQ05516.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2303 S-layer domain protein.
  
     0.402
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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