STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04945.1KEGG: csc:Csac_1703 hypothetical protein. (86 aa)    
Predicted Functional Partners:
ADQ04946.1
PFAM: Protein of unknown function DUF2442; KEGG: ate:Athe_1650 hypothetical protein.
 
     0.934
ADQ05509.1
KEGG: ate:Athe_2289 hypothetical protein.
  
     0.624
ADQ05523.1
KEGG: csc:Csac_2488 hypothetical protein.
  
     0.620
ADQ04150.1
KEGG: csc:Csac_0008 hypothetical protein.
  
     0.618
ADQ03746.1
KEGG: ate:Athe_2630 hypothetical protein.
  
     0.585
ADQ03840.1
KEGG: ate:Athe_0367 hypothetical protein.
  
     0.564
ADQ04944.1
PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_1648 major facilitator superfamily MFS_1.
       0.527
ADQ05244.1
PFAM: protein of unknown function DUF820; KEGG: ate:Athe_2598 protein of unknown function DUF820.
  
     0.448
ADQ04943.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.444
ADQ05510.1
PFAM: protein of unknown function DUF820; KEGG: ate:Athe_2290 protein of unknown function DUF820.
  
     0.426
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.