Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04946.1PFAM: Protein of unknown function DUF2442; KEGG: ate:Athe_1650 hypothetical protein. (113 aa)    
Predicted Functional Partners:
ADQ04945.1
KEGG: csc:Csac_1703 hypothetical protein.
 
     0.929
ADQ04939.1
PFAM: DNA polymerase beta domain protein region; KEGG: ate:Athe_1643 DNA polymerase beta domain protein region.
 
     0.731
ADQ05326.1
KEGG: ate:Athe_2106 protein of unknown function DUF362.
  
     0.504
ADQ04944.1
PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_1648 major facilitator superfamily MFS_1.
       0.478
ADQ04943.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.406
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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