Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ05054.1PFAM: Sporulation protein YtxC; KEGG: ate:Athe_1765 sporulation protein YtxC. (298 aa)    
Predicted Functional Partners:
ADQ05125.1
KEGG: ate:Athe_1835 uncharacterized membrane protein.
 
     0.731
ADQ05055.1
KEGG: ate:Athe_1766 hypothetical protein.
 
     0.729
ADQ04795.1
KEGG: ate:Athe_1458 hypothetical protein.
  
    0.689
ADQ05223.1
KEGG: ate:Athe_1954 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
     0.688
ADQ05232.1
KEGG: ate:Athe_1972 hypothetical protein.
  
     0.647
ADQ05224.1
KEGG: ate:Athe_1955 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.638
ADQ04348.1
PFAM: Sporulation stage III protein AE; KEGG: ate:Athe_0994 hypothetical protein.
  
     0.617
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
 
     0.595
ADQ04714.1
KEGG: ate:Athe_1362 hypothetical protein.
  
     0.588
ADQ05765.1
KEGG: ate:Athe_2766 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.582
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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