STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05067.1Transcriptional regulator, GntR family; Manually curated; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: ate:Athe_1778 transcriptional regulator, GntR family; SMART: regulatory protein GntR HTH. (246 aa)    
Predicted Functional Partners:
ADQ05068.1
PFAM: inner-membrane translocator; KEGG: csc:Csac_2321 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.826
ADQ05066.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.824
ADQ05070.1
KEGG: ate:Athe_1781 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.815
ADQ05069.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_1780 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.801
ADQ05065.1
TIGRFAM: XapX domain protein; KEGG: ate:Athe_1776 hypothetical protein.
 
     0.755
ADQ05064.1
KEGG: ate:Athe_1775 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain.
     
 0.730
ADQ04923.1
KEGG: ate:Athe_1627 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
  
 0.710
ADQ05358.1
KEGG: ate:Athe_2139 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain.
  
  
 0.710
ADQ05071.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
       0.703
ADQ03666.1
KEGG: ate:Athe_0096 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase.
 
  
 0.694
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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