STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05129.1PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1839 S-layer domain protein. (575 aa)    
Predicted Functional Partners:
ADQ05211.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.
  
     0.773
ADQ05674.1
KEGG: ate:Athe_2600 hypothetical protein.
  
     0.762
ADQ05130.1
KEGG: csc:Csac_2382 GAF domain-containing protein; PFAM: GAF domain protein; SMART: GAF domain protein.
 
     0.746
ADQ05582.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.735
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.728
ADQ03645.1
KEGG: csc:Csac_2571 hypothetical protein.
  
     0.713
ADQ04067.1
PFAM: glycoside hydrolase starch-binding; S-layer domain-containing protein; KEGG: ate:Athe_0610 glycoside hydrolase starch-binding.
  
     0.709
ADQ04606.1
KEGG: ate:Athe_1252 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
  
     0.692
ADQ04595.1
KEGG: ate:Athe_1241 hypothetical protein.
  
     0.689
ADQ05747.1
PFAM: Colicin V production protein; KEGG: ate:Athe_2747 hypothetical protein.
 
     0.685
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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