Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ05135.1KEGG: cpf:CPF_0497 von Willebrand factor type A domain-containing protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A. (667 aa)    
Predicted Functional Partners:
ADQ05138.1
KEGG: ate:Athe_1873 hypothetical protein.
       0.595
ADQ05137.1
KEGG: csc:Csac_1072 hypothetical protein.
       0.543
ADQ05140.1
Manually curated; KEGG: csc:Csac_1069 Tfp pilus assembly protein ATPase PilM-like protein.
       0.543
ADQ05136.1
KEGG: cce:Ccel_2404 hypothetical protein.
       0.526
ADQ05139.1
PFAM: Fimbrial assembly family protein; KEGG: ate:Athe_1874 fimbrial assembly family protein.
       0.497
ADQ05144.1
KEGG: csc:Csac_1065 peptidase A24A domain-containing protein; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV.
       0.449
ADQ04176.1
PFAM: Methyltransferase type 12; KEGG: ate:Athe_0753 methyltransferase type 11.
   
 
 0.419
ADQ05146.1
KEGG: csc:Csac_1063 hypothetical protein.
       0.410
ADQ05142.1
KEGG: csc:Csac_1067 hypothetical protein.
       0.405
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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