Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ05156.1KEGG: ate:Athe_1894 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (408 aa)    
Predicted Functional Partners:
ADQ05157.1
PFAM: transport system permease protein; KEGG: ate:Athe_1895 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.987
ADQ05158.1
PFAM: periplasmic binding protein; KEGG: ate:Athe_1896 periplasmic binding protein.
 
 
 0.980
ADQ03799.1
PFAM: transport system permease protein; KEGG: csc:Csac_0174 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.948
ADQ03798.1
PFAM: periplasmic binding protein; KEGG: ate:Athe_0273 periplasmic binding protein.
 
 
 0.889
ADQ05155.1
KEGG: ate:Athe_1893 protein of unknown function DUF1121.
       0.724
ADQ05159.1
PFAM: glycine cleavage H-protein; KEGG: ate:Athe_1897 glycine cleavage H-protein.
       0.586
ADQ05160.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ate:Athe_1898 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.524
ADQ05161.1
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ate:Athe_1899 cytochrome c biogenesis protein transmembrane region.
  
    0.461
ADQ05163.1
PFAM: PemK family protein; KEGG: ate:Athe_1901 transcriptional modulator of MazE/toxin, MazF.
     
 0.444
ADQ05162.1
KEGG: ate:Athe_1900 hypothetical protein.
       0.430
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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