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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05176.1TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ate:Athe_1914 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase. (321 aa)    
Predicted Functional Partners:
ADQ05178.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_1916 binding-protein-dependent transport systems inner membrane component.
 0.998
ADQ05175.1
PFAM: extracellular solute-binding protein family 5; KEGG: csc:Csac_1032 extracellular solute-binding protein.
 
 
 0.994
ADQ05179.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_1917 binding-protein-dependent transport systems inner membrane component.
 
 0.994
ADQ05177.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ate:Athe_1915 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase.
 
 
 
0.993
ADQ05174.1
KEGG: ate:Athe_1912 hypothetical protein.
       0.418
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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