Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ05210.1KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3. (266 aa)    
Predicted Functional Partners:
ADQ05209.1
KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 0.999
ADQ05208.1
KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.996
ADQ05207.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: ate:Athe_1939 protein of unknown function DUF6 transmembrane.
 
   
 0.613
ADQ05211.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.
     
 0.533
ADQ05740.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold-3 domain protein; KEGG: ate:Athe_2740 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein.
     
 0.472
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
       0.456
ADQ05206.1
PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: ate:Athe_1938 beta-lactamase domain protein.
       0.451
ADQ05213.1
KEGG: ate:Athe_1945 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.
       0.428
ADQ04458.1
PFAM: OmpA/MotB domain protein; KEGG: ate:Athe_1073 OmpA/MotB domain protein.
    
   0.424
ADQ05381.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.424
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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