ADQ05213.1 protein (Caldicellulosiruptor owensensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ADQ05213.1

KEGG: ate:Athe_1945 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein. (1265 aa)

Predicted Functional Partners:

ADQ05212.1

0.762

ADQ05211.1

0.639

ADQ05214.1

0.560

ADQ05215.1

0.494

ADQ05216.1

0.471

ADQ05210.1

0.428

ADQ05208.1

0.409

ADQ05209.1

0.409

Your Current Organism:

Caldicellulosiruptor owensensis

NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADQ05208.1	ADQ05209.1	Calow_1663	Calow_1664	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.999
ADQ05208.1	ADQ05210.1	Calow_1663	Calow_1665	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	0.997
ADQ05208.1	ADQ05211.1	Calow_1663	Calow_1666	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	0.499
ADQ05208.1	ADQ05212.1	Calow_1663	Calow_1667	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.	0.435
ADQ05208.1	ADQ05213.1	Calow_1663	Calow_1668	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	KEGG: ate:Athe_1945 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.	0.409
ADQ05209.1	ADQ05208.1	Calow_1664	Calow_1663	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	0.999
ADQ05209.1	ADQ05210.1	Calow_1664	Calow_1665	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	0.999
ADQ05209.1	ADQ05211.1	Calow_1664	Calow_1666	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	0.499
ADQ05209.1	ADQ05212.1	Calow_1664	Calow_1667	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.	0.435
ADQ05209.1	ADQ05213.1	Calow_1664	Calow_1668	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: ate:Athe_1945 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.	0.409
ADQ05210.1	ADQ05208.1	Calow_1665	Calow_1663	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	0.997
ADQ05210.1	ADQ05209.1	Calow_1665	Calow_1664	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.999
ADQ05210.1	ADQ05211.1	Calow_1665	Calow_1666	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	0.538
ADQ05210.1	ADQ05212.1	Calow_1665	Calow_1667	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.	0.456
ADQ05210.1	ADQ05213.1	Calow_1665	Calow_1668	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	KEGG: ate:Athe_1945 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.	0.428
ADQ05211.1	ADQ05208.1	Calow_1666	Calow_1663	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.	0.499
ADQ05211.1	ADQ05209.1	Calow_1666	Calow_1664	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.499
ADQ05211.1	ADQ05210.1	Calow_1666	Calow_1665	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.	0.538
ADQ05211.1	ADQ05212.1	Calow_1666	Calow_1667	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.	0.815
ADQ05211.1	ADQ05213.1	Calow_1666	Calow_1668	PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.	KEGG: ate:Athe_1945 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.	0.639

page 1 of 3

Server load: medium (46%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About