Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ05213.1KEGG: ate:Athe_1945 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein. (1265 aa)    
Predicted Functional Partners:
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
       0.771
ADQ05211.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.
       0.636
ADQ05214.1
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ate:Athe_1946 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase.
       0.555
ADQ05215.1
PFAM: Radical SAM domain protein; KEGG: ate:Athe_1947 radical SAM domain protein.
       0.494
ADQ05216.1
Radical SAM domain protein; KEGG: ate:Athe_1948 coproporphyrinogen dehydrogenase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.471
ADQ05210.1
KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
       0.428
ADQ05208.1
KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.409
ADQ05209.1
KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
       0.409
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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