Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ05224.1KEGG: ate:Athe_1955 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein. (366 aa)    
Predicted Functional Partners:
ADQ05223.1
KEGG: ate:Athe_1954 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
  
 0.965
ADQ05225.1
PFAM: GerA spore germination protein; KEGG: ate:Athe_1956 GerA spore germination protein.
 
  
 0.958
ADQ05766.1
KEGG: ate:Athe_2767 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
  
 0.784
ADQ05222.1
PFAM: Sporulation stage II protein R; KEGG: ate:Athe_1953 hypothetical protein.
 
   
 0.783
ADQ05764.1
PFAM: GerA spore germination protein; KEGG: ate:Athe_2765 GerA spore germination protein.
 
  
 0.774
ADQ05081.1
KEGG: ate:Athe_1792 germination protein YpeB; TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4.
 
   
 0.761
ADQ04208.1
Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.742
ADQ04240.1
KEGG: ate:Athe_0817 hypothetical protein.
  
     0.725
ADQ05088.1
SMART: PDZ/DHR/GLGF domain protein; KEGG: ate:Athe_1797 PDZ/DHR/GLGF domain protein.
  
     0.711
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.701
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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