mrnC protein (Caldicellulosiruptor owensensis)

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mrnC

Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (151 aa)

Predicted Functional Partners:

ADQ05266.1

0.899

cysS

0.880

ADQ05267.1

0.840

ADQ05274.1

0.828

rplC

0.795

ADQ04701.1

0.748

ADQ05272.1

0.748

rpmA

0.741

rplU

0.740

rpmG

0.738

Your Current Organism:

Caldicellulosiruptor owensensis

NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADQ04701.1	ADQ05266.1	Calow_1139	Calow_1728	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	PFAM: protein of unknown function DUF901; KEGG: ate:Athe_2042 protein of unknown function DUF901.	0.646
ADQ04701.1	mrnC	Calow_1139	Calow_1735	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.748
ADQ04701.1	rplC	Calow_1139	Calow_1487	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.589
ADQ04701.1	rplU	Calow_1139	Calow_0933	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.727
ADQ04701.1	rpmA	Calow_1139	Calow_0935	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	KEGG: ate:Athe_1120 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.704
ADQ04701.1	rpmG	Calow_1139	Calow_1309	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	KEGG: ate:Athe_1534 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.769
ADQ05266.1	ADQ04701.1	Calow_1728	Calow_1139	PFAM: protein of unknown function DUF901; KEGG: ate:Athe_2042 protein of unknown function DUF901.	KEGG: ate:Athe_1347 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.	0.646
ADQ05266.1	ADQ05267.1	Calow_1728	Calow_1729	PFAM: protein of unknown function DUF901; KEGG: ate:Athe_2042 protein of unknown function DUF901.	KEGG: ate:Athe_2043 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.968
ADQ05266.1	cysS	Calow_1728	Calow_1931	PFAM: protein of unknown function DUF901; KEGG: ate:Athe_2042 protein of unknown function DUF901.	TIGRFAM: cysteinyl-tRNA synthetase; KEGG: ate:Athe_2253 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.836
ADQ05266.1	mrnC	Calow_1728	Calow_1735	PFAM: protein of unknown function DUF901; KEGG: ate:Athe_2042 protein of unknown function DUF901.	Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.899
ADQ05267.1	ADQ05266.1	Calow_1729	Calow_1728	KEGG: ate:Athe_2043 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	PFAM: protein of unknown function DUF901; KEGG: ate:Athe_2042 protein of unknown function DUF901.	0.968
ADQ05267.1	cysS	Calow_1729	Calow_1931	KEGG: ate:Athe_2043 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	TIGRFAM: cysteinyl-tRNA synthetase; KEGG: ate:Athe_2253 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.848
ADQ05267.1	mrnC	Calow_1729	Calow_1735	KEGG: ate:Athe_2043 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.840
ADQ05267.1	rplC	Calow_1729	Calow_1487	KEGG: ate:Athe_2043 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.817
ADQ05267.1	rplU	Calow_1729	Calow_0933	KEGG: ate:Athe_2043 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.787
ADQ05267.1	rpmA	Calow_1729	Calow_0935	KEGG: ate:Athe_2043 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	KEGG: ate:Athe_1120 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.472
ADQ05272.1	ADQ05274.1	Calow_1734	Calow_1736	PFAM: protein of unknown function DUF1646; KEGG: ate:Athe_2048 protein of unknown function DUF1646.	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ate:Athe_2050 Orn/Lys/Arg decarboxylase major region.	0.741
ADQ05272.1	mrnC	Calow_1734	Calow_1735	PFAM: protein of unknown function DUF1646; KEGG: ate:Athe_2048 protein of unknown function DUF1646.	Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.748
ADQ05274.1	ADQ05272.1	Calow_1736	Calow_1734	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ate:Athe_2050 Orn/Lys/Arg decarboxylase major region.	PFAM: protein of unknown function DUF1646; KEGG: ate:Athe_2048 protein of unknown function DUF1646.	0.741
ADQ05274.1	mrnC	Calow_1736	Calow_1735	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ate:Athe_2050 Orn/Lys/Arg decarboxylase major region.	Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.828

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