Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADQ05301.1Alpha-L-fucosidase; KEGG: cce:Ccel_1020 hypothetical protein. (752 aa)    
Predicted Functional Partners:
ADQ05292.1
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: ate:Athe_2072 alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase).
 
 
  0.963
ADQ05302.1
PFAM: protein of unknown function DUF1680; KEGG: pjd:Pjdr2_1987 protein of unknown function DUF1680.
 
     0.916
ADQ05311.1
KEGG: ate:Athe_2090 hypothetical protein.
  
   
 0.715
ADQ05565.1
PFAM: lipolytic protein G-D-S-L family; KEGG: ate:Athe_2325 lipolytic protein G-D-S-L family.
  
   0.692
ADQ03732.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: ate:Athe_0185 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
   
 0.683
ADQ03729.1
Glycoside hydrolase family 43; KEGG: csc:Csac_2411 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 43; Carbohydrate-binding CenC domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV.
  
   
 0.675
ADQ05306.1
PFAM: S-layer domain-containing protein; FG-GAP repeat protein; KEGG: bsu:BSU07050 polysaccharide lyase; lipoprotein.
  
   
 0.658
ADQ04207.1
PFAM: protein of unknown function DUF303 acetylesterase; glycoside hydrolase family 2 sugar binding; KEGG: csc:Csac_0206 protein of unknown function DUF303, acetylesterase putative; Belongs to the glycosyl hydrolase 2 family.
  
   0.652
ADQ05621.1
PFAM: Pectinesterase; Pectate lyase/Amb allergen; KEGG: bcv:Bcav_3362 hypothetical protein.
  
  
 0.646
ADQ05636.1
PFAM: Pectinesterase; KEGG: trq:TRQ2_0501 pectinesterase.
  
   
 0.641
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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