Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ05307.1PFAM: oxidoreductase domain protein; KEGG: ate:Athe_2082 oxidoreductase domain protein. (405 aa)    
Predicted Functional Partners:
ADQ05308.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ate:Athe_2083 alcohol dehydrogenase zinc-binding domain protein.
 
    0.749
ADQ05309.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: ate:Athe_2084 fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
 
  
 0.743
ADQ05669.1
PFAM: oxidoreductase domain protein; KEGG: ate:Athe_2585 oxidoreductase domain protein.
  
     0.728
ADQ05310.1
KEGG: ate:Athe_2085 dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase.
       0.675
ADQ05575.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: csc:Csac_0598 xylose isomerase domain-containing protein.
 
  
 0.639
ADQ05312.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_2091 extracellular solute-binding protein family 1.
 
     0.545
lysS
KEGG: ate:Athe_0659 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.538
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.536
ADQ05573.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ate:Athe_2333 xylose isomerase domain protein TIM barrel.
 
  
 0.513
ADQ05311.1
KEGG: ate:Athe_2090 hypothetical protein.
 
     0.507
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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