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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05346.1KEGG: ate:Athe_2127 hypothetical protein. (154 aa)    
Predicted Functional Partners:
ADQ03855.1
Sporulation protein YunB; KEGG: ate:Athe_0396 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like.
  
     0.708
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.687
ADQ04346.1
TIGRFAM: stage III sporulation protein AC; KEGG: ate:Athe_0992 stage III sporulation protein AC.
 
     0.635
ADQ04665.1
KEGG: ate:Athe_1311 hypothetical protein.
  
     0.578
ADQ04714.1
KEGG: ate:Athe_1362 hypothetical protein.
  
     0.549
ADQ04695.1
KEGG: ate:Athe_1341 hypothetical protein.
  
     0.513
ADQ04664.1
PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; KEGG: ate:Athe_1310 thiamin pyrophosphokinase catalytic region.
  
     0.472
ADQ04667.1
Hypothetical protein; Manually curated; KEGG: ate:Athe_1313 hypothetical protein.
  
     0.456
ADQ05344.1
KEGG: ate:Athe_2125 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein.
       0.436
ADQ05345.1
PFAM: aminotransferase class V; KEGG: ate:Athe_2126 aminotransferase class V.
       0.436
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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