Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADQ05408.1PFAM: ABC-3 protein; KEGG: ate:Athe_2192 ABC-3 protein. (271 aa)    
Predicted Functional Partners:
ADQ05406.1
PFAM: periplasmic solute binding protein; KEGG: ate:Athe_2190 periplasmic solute binding protein.
 
 
 0.999
ADQ05407.1
KEGG: ate:Athe_2191 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
ADQ05405.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: ate:Athe_2189 ferric uptake regulator, Fur family.
 
  
 0.864
ADQ05209.1
KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
  
 
 0.594
ADQ05404.1
Regulatory protein ArsR; KEGG: ate:Athe_2186 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
  
  
 0.467
ADQ05658.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_2574 extracellular solute-binding protein family 1.
  
  
  0.452
ADQ05094.1
KEGG: csc:Csac_2346 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase.
    
 0.416
ADQ05175.1
PFAM: extracellular solute-binding protein family 5; KEGG: csc:Csac_1032 extracellular solute-binding protein.
    
 0.415
ADQ04283.1
KEGG: ate:Athe_0860 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
     
 0.412
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
     
 0.412
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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