Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ03645.1 | ADQ03727.1 | Calow_0025 | Calow_0119 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | 0.769 |
ADQ03645.1 | ADQ03728.1 | Calow_0025 | Calow_0120 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0181 extracellular solute-binding protein family 1. | 0.772 |
ADQ03645.1 | ADQ03873.1 | Calow_0025 | Calow_0272 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein. | 0.774 |
ADQ03645.1 | ADQ04027.1 | Calow_0025 | Calow_0443 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ate:Athe_0578 PBS lyase heat domain protein repeat-containing protein. | 0.767 |
ADQ03645.1 | ADQ04160.1 | Calow_0025 | Calow_0583 | KEGG: csc:Csac_2571 hypothetical protein. | KEGG: ate:Athe_0715 hypothetical protein. | 0.773 |
ADQ03645.1 | ADQ04282.1 | Calow_0025 | Calow_0709 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: cobalt transport protein; KEGG: ate:Athe_0859 cobalt transport protein. | 0.766 |
ADQ03645.1 | ADQ04452.1 | Calow_0025 | Calow_0885 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_1067 major facilitator superfamily MFS_1. | 0.719 |
ADQ03645.1 | ADQ05212.1 | Calow_0025 | Calow_1667 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein. | 0.774 |
ADQ03645.1 | ADQ05466.1 | Calow_0025 | Calow_1937 | KEGG: csc:Csac_2571 hypothetical protein. | KEGG: ate:Athe_2260 hypothetical protein. | 0.768 |
ADQ03645.1 | ADQ05582.1 | Calow_0025 | Calow_2071 | KEGG: csc:Csac_2571 hypothetical protein. | PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein. | 0.774 |
ADQ03727.1 | ADQ03645.1 | Calow_0119 | Calow_0025 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | KEGG: csc:Csac_2571 hypothetical protein. | 0.769 |
ADQ03727.1 | ADQ03728.1 | Calow_0119 | Calow_0120 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0181 extracellular solute-binding protein family 1. | 0.533 |
ADQ03727.1 | ADQ03873.1 | Calow_0119 | Calow_0272 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein. | 0.754 |
ADQ03727.1 | ADQ04027.1 | Calow_0119 | Calow_0443 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ate:Athe_0578 PBS lyase heat domain protein repeat-containing protein. | 0.717 |
ADQ03727.1 | ADQ04160.1 | Calow_0119 | Calow_0583 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | KEGG: ate:Athe_0715 hypothetical protein. | 0.741 |
ADQ03727.1 | ADQ04282.1 | Calow_0119 | Calow_0709 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | PFAM: cobalt transport protein; KEGG: ate:Athe_0859 cobalt transport protein. | 0.707 |
ADQ03727.1 | ADQ04452.1 | Calow_0119 | Calow_0885 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_1067 major facilitator superfamily MFS_1. | 0.684 |
ADQ03727.1 | ADQ05212.1 | Calow_0119 | Calow_1667 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein. | 0.769 |
ADQ03727.1 | ADQ05466.1 | Calow_0119 | Calow_1937 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | KEGG: ate:Athe_2260 hypothetical protein. | 0.753 |
ADQ03727.1 | ADQ05582.1 | Calow_0119 | Calow_2071 | PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein. | PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein. | 0.761 |
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