STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (499 aa)    
Predicted Functional Partners:
ADQ05475.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_2265 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.993
ADQ05474.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ate:Athe_2264 periplasmic binding protein/LacI transcriptional regulator.
 0.975
ADQ05478.1
KEGG: csc:Csac_0238 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 
0.944
ADQ03914.1
PFAM: inner-membrane translocator; KEGG: smd:Smed_3767 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.921
ADQ05471.1
PFAM: extracellular solute-binding protein family 1; KEGG: tle:Tlet_1140 extracellular solute-binding protein.
    
  0.917
ADQ05470.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: str:Sterm_0718 binding-protein-dependent transport systems inner membrane component.
  
 
  0.912
ADQ03674.1
PFAM: inner-membrane translocator; KEGG: bbe:BBR47_06820 galactoside ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.822
ADQ03911.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: monosacharide ABC transporter periplasmic monosacharide-binding protein.
 
 
 0.821
ADQ03672.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_0107 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
 0.779
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.647
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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