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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05490.1KEGG: mcp:MCAP_0861 hypothetical protein. (213 aa)    
Predicted Functional Partners:
ADQ05489.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: cpr:CPR_0584 glycosyltransferase; PFAM: sugar transferase.
       0.773
ADQ05491.1
PFAM: S-layer domain-containing protein; KEGG: pjd:Pjdr2_4682 metallophosphoesterase.
       0.559
ADQ05492.1
KEGG: mch:Mchl_1408 hypothetical protein.
       0.559
ADQ05493.1
Protein-tyrosine-phosphatase; KEGG: slg:SLGD_00325 capsular polysaccharide synthesis enzyme Cap5C; manganese-dependent protein-tyrosine phosphatase; PFAM: PHP domain protein.
       0.517
ADQ05494.1
KEGG: dae:Dtox_4107 capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family.
       0.517
ADQ05495.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: cno:NT01CX_1522 Cps19aC, putative.
       0.517
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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