STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05492.1KEGG: mch:Mchl_1408 hypothetical protein. (122 aa)    
Predicted Functional Partners:
ADQ05491.1
PFAM: S-layer domain-containing protein; KEGG: pjd:Pjdr2_4682 metallophosphoesterase.
     
 0.782
ADQ05494.1
KEGG: dae:Dtox_4107 capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family.
     
 0.717
ADQ05495.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: cno:NT01CX_1522 Cps19aC, putative.
       0.716
ADQ05493.1
Protein-tyrosine-phosphatase; KEGG: slg:SLGD_00325 capsular polysaccharide synthesis enzyme Cap5C; manganese-dependent protein-tyrosine phosphatase; PFAM: PHP domain protein.
     
 0.715
ADQ05489.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: cpr:CPR_0584 glycosyltransferase; PFAM: sugar transferase.
  
    0.587
ADQ05490.1
KEGG: mcp:MCAP_0861 hypothetical protein.
       0.559
ADQ05619.1
KEGG: tit:Thit_1727 pectate disaccharide-lyase; PFAM: S-layer domain-containing protein; Ig domain protein.
   
   0.501
ADQ05623.1
PFAM: glycoside hydrolase family 28; KEGG: ate:Athe_2380 galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family.
   
   0.501
ADQ05496.1
TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: csc:Csac_0232 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein.
       0.413
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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