STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05494.1KEGG: dae:Dtox_4107 capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family. (257 aa)    
Predicted Functional Partners:
ADQ05495.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: cno:NT01CX_1522 Cps19aC, putative.
 
 0.999
ADQ05493.1
Protein-tyrosine-phosphatase; KEGG: slg:SLGD_00325 capsular polysaccharide synthesis enzyme Cap5C; manganese-dependent protein-tyrosine phosphatase; PFAM: PHP domain protein.
 
  
 0.980
ADQ05489.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: cpr:CPR_0584 glycosyltransferase; PFAM: sugar transferase.
 
  
 0.970
ADQ03649.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: csc:Csac_2566 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.914
ADQ03901.1
KEGG: ate:Athe_0462 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.845
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
   
   0.759
ADQ05492.1
KEGG: mch:Mchl_1408 hypothetical protein.
     
 0.718
ADQ05491.1
PFAM: S-layer domain-containing protein; KEGG: pjd:Pjdr2_4682 metallophosphoesterase.
  
    0.711
ADQ04429.1
KEGG: ate:Athe_1045 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein.
    
 
 0.617
ADQ04950.1
PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein.
    
   0.567
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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